GAP PromethION, Reference genomes, 378159

Austrobaileya scandens C.T.White, Austrobaileyaceae, Darren Crayn

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Additional Info Show Blank Fields

Field Value
Resource Permissions organization_member_after_embargo:date_of_transfer_to_archive:365:gap-consortium-members
Access Control Date 2024-05-23
Access Control Mode date
Sequence Data Type ont-promethion
base_url https://downloads-qcif.bioplatforms.com/bpa/plants_staging/ont-promethion/BPAOPS-1399/20230424_GAP_BRF_PAO34975/
ccg_jira_ticket BPAOPS-1399
cell_postion 2B
country Australia
data_type Main dataset (Phase 4 ref genomes)
dataset_id 83770
date_data_published 02/06/2023
date_of_transfer 2023-05-24
date_of_transfer_to_archive 2023-05-29
description PromethION
download https://data.bioplatforms.com/dataset?ext_search_by=&q=ticket%3ABPAOPS-1399
facility BRF
family Austrobaileyaceae
flow_cell_id PAO34975
flow_cell_type FLO-PRO114M
folder_name 20230424_GAP_BRF_PAO34975
genomic_material_associated_references Jones et al (2021) PLOS ONE https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0253830
genomic_material_preparation_date 2023-02-01
genomic_material_preparation_materials In the protocol
genomic_material_preparation_process Jones et al (2021) PLOS ONE https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0253830
genomic_material_preparation_type Leaf gDNA
genomic_material_prepared_by Ashley Jones
herbarium_code CNS
insert_size_range 40Kb
library_construction_protocol SQK-LSK114
library_id 102.100.100/383146
living_collections_material_sample_rna N/A
living_collections_record_number 20100039.0
location_notes Cultivated Cairns Botanic Gardens. Wild sourced from the vicinity of Ravenshoe, Qld.
metadata_revision_date 2025-10-14
metadata_revision_filename 2025-10-15_Combined_plant_sample_metadata_forQCIF.xlsx
nagoya_protocol_compliance Pre-Nagoya
nanopore_software_version 22.12.5
preservation_date_begin 2022-11-01
preservation_temperature Leaf −80°C (2022-11), DNA 4°C (2023-02)
preservation_type Freezing, fridge
project_aim Reference genomes
sample_id 102.100.100/378159
sample_submission_date 2022-09-19
sample_submitter_email darren.crayn@jcu.edu.au
sample_submitter_name Darren Crayn
scientific_name Austrobaileya scandens
scientific_name_authorship C.T.White
sequencer Promethion
state_or_territory Queensland
ticket BPAOPS-1399
voucher_herbarium_catalog_number 1654
voucher_herbarium_collector_id D.M. Crayn
voucher_herbarium_record_number 153187