southern corroboree frog, Transcriptome

Pseudophryne corroboree, psco_05_dskin_pos, Carolyn Hogg

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Additional Info Show Blank Fields

Field Value
Resource Permissions organization_member_after_embargo:date_of_transfer_to_archive:365:cipps007
Access Control Date 2025-08-23
Access Control Mode date
Sequence Data Type illumina-transcriptomics
analysis_software BCLConvert
analysis_software_version 4.1.7
base_url https://downloads-qcif.bioplatforms.com/bpa/cipps_staging/illumina-shortread/BPAOPS-1659/20240708_CIPPS_UNSW_22KTT3LT3/
bioplatforms_dataset_id 102.100.100/419490
bioplatforms_library_id 102.100.100/417566
bioplatforms_project CIPPS
bioplatforms_project_code CIPPS_corroboree
bioplatforms_sample_id 102.100.100/415564
common_name southern corroboree frog
data_context Transcriptome
data_custodian Carolyn Hogg
date_of_transfer 2024-08-23
date_of_transfer_to_archive 2024-09-03
facility_project_code Q0014487
facility_sample_id PEE13817A41
file_type fastq.gz
flowcell_id 22KTT3LT3
flowcell_type NovaSeq X 10B
genus Pseudophryne
insert_size_range 150 PE
library_construction_protocol Illumina Stranded mRNA Prep Ligation
library_id 417566
library_index_id UDP0040
library_index_sequence TATGTAGTCA-CGCACTAATG
library_location Ramaciotti Centre for Genomics
library_ng_ul 43.8
library_pcr_cycles 12
library_pcr_reps 1
library_prep_date 2024-06-25
library_prepared_by Ramaciotti Centre for Genomics
library_selection Oligo-dT
library_source TRANSCRIPTOMIC
library_strategy RNA-Seq
library_type illumina-transcriptomics
metadata_revision_date 2025-08-06
metadata_revision_filename 20250806_CIPPS_Sample_metadata_COMBINED-FOR-PORTAL_NOLATLON.xlsx
n_libraries_pooled 49.0
scientific_name Pseudophryne corroboree
sequencing_facility Ramaciotti Centre for Genomics
sequencing_kit_chemistry_version NovaSeq X v1.0
sequencing_model Illumina NovaSeq X Plus
sequencing_platform ILLUMINA
species corroboree
specimen_id psco_05_dskin_pos
ticket BPAOPS-1659
tissue_number psco_05_dorsal_skin_pos
work_order 14070