Pig-nosed turtle, Reference Genome, ONT-promethion

Carettochelyidae, Carettochelys insculpta, turtle, Project Lead: Arthur Georges

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Additional Info Show Blank Fields

Field Value
Resource Permissions organization_member_after_embargo:date_of_transfer_to_archive:10:ausarg-consortium-members
Access Control Date 2021-07-29
Access Control Mode date
Sequence Data Type ONT-promethion
analysis_software MinKNOW Core, Bream, Guppy
analysis_software_version MinKNOW Core 4.0.5, Bream 6.0.10, Guppy 4.0.11
base_url https://downloads-qcif.bioplatforms.com/bpa/ausarg_staging/promethion/BPAOPS-1113/20210714_AusARG_RamaciottiGarvan_350836/
class Reptilia
common_name Pig-nosed turtle
data_context Reference Genome
data_custodian Arthur Georges
data_type ONT-promethion
dataset_id 102.100.100/351775
date_of_transfer 2021-07-19
date_of_transfer_to_archive 2021-07-20
description PromethION
experimental_design ONT PromethION
facility RamaciottiGarvan
facility_project_code Q0006256
facility_sample_id PBXP143368
family Carettochelyidae
fast5_compression zlib
flowcell_id PAG89749
flowcell_type FLO-PRO002
folder_name 20210714_AusARG_RamaciottiGarvan_350836
genus Carettochelys
library_construction_protocol SQK-LSK110
library_id 102.100.100/350836
library_prep_date 2021-06-17
library_prepared_by Tonia Russell at Ramaciotti Centre for Genomics
library_source GENOMIC
library_strategy WGS
metadata_revision_date 2024-11-15
metadata_revision_filename AusARG_Metadata_master_QCIF_20241115_FORDATAPORTAL.xlsx
model_base_caller High-accuracy basecalling
order Testudines
phylum Chordata
project_aim Reference genome
sample_custodian Arthur Georges
sample_id 102.100.100/349828
sequencing_facility Ramaciotti/Garvan
sequencing_model PromethION
sequencing_platform OXFORD_NANOPORE
species insculpta
subspecies NA
taxon_id 44489
taxonomic_group turtle
ticket BPAOPS-1113
work_order 13023